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Biotechnology Information blastn function
Blastn Function, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/blastn+function/blastn+program/pmc13208402-124-10-19
Average 86 stars, based on 1 article reviews
blastn function - by Bioz Stars, 2026-11
86/100 stars

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Article Title: Regulation of drug transporter gene expression by nuclear receptors.
Article Snippet: Pregnane X receptor (PXR) and constitutive androstane receptor (CAR) are key regulators of xenobiotic-inducible cytochrome P450 gene expression.. Whereas much is known about their role in regulating drug metabolism, little is known regarding their role in regulating drug transport in vivo.. Wild-type mice and mice lacking PXR (PXR-KO) were used to examine the inducible expression of two drug transporter genes, Oatp2 (Slc21a5) and Mrp3 (Abcc3), in liver following treatment with selective PXR and CAR activators.

Article Title: Genomes of ‘Candidatus Liberibacter solanacearum’ Haplotype A from New Zealand and the United States Suggest Significant Genome Plasticity in the Species
Article Snippet: L. solanacearum’ NZ1 identified by OrthoMCL as specific to haplotype A were screened using the BLASTn function against the National Center for Biotechnology Information (NCBI) nr database in Geneious.

Article Title: The role of irradiance in controlling coralline algal calcification
Article Snippet: These were then blasted against the National Centre for Biotechnology Information (NCBI) GenBank using the “blastn” function (https://blast.ncbi.nlm.nih.gov/) to check species identity.

Article Title: Burkholderia glumae MA13: A newly isolated bacterial strain suitable for polyhydroxyalkanoate production from crude glycerol
Article Snippet: Burkholderia glumae MA13 was isolated from soil samples of Atlantic rain forest ecosystem as a new bacterial strain for polyhydroxyalkanoate (PHA) production from crude glycerol as sole carbon source.. Among 107 glycerol consuming bacterial isolates, B. glumae MA13 was cultivated in shake flask experiments in order to verify its PHA production capability from crude glycerol besides waste cooking oil and sugarcane molasses free of pretreatment, showing intracellular poly(3-hydroxybutyrate) [P(3HB)] accumulation values of 51.3, 51.4 and 49% of cell dry weight (CDW), respectively.. The addition of propionic or hexanoic acids to the media containing crude glycerol resulted in the copolymers poly(3-hydroxybutyrate-co-3-hydroxyvalerate) [P(3HB-co-3HV)] comprised of up to 32.1 mol% of 3HV monomer or poly(3-hydroxybutyrate-co-3-hydroxyhexanoate) [P(3HB-co3HHx)] with a maximum of 0.3 mol% of 3HHx, respectively.

Article Title: Anaerobic and Aerobic Degradation of Cyanophycin by the Denitrifying Bacterium Pseudomonas alcaligenes Strain DIP1 and Role of Three Other Coisolates in a Mixed Bacterial Consortium
Article Snippet: The 16S rRNA gene sequences were aligned with previously published sequences of representative strains using the BLASTn function from the National Center for Biotechnology Information (NCBI) database.

Software:

Article Title: Potential of Indonesian Marine Endophytic Fungi as Extracellular Enzymes Producers
Article Snippet: .. The obtained DNA sequences were searched for similarity through the BLASTn function on the NCBI website (National Center for Biotechnology Information http://www.ncbi.nlm.nih.gov/BLAST , accessed on 22 May 2025) and analyzed for genetic relationships through phylogenetic tree analysis using MEGA 11.0 software [ ]. ..

Sequencing:

Article Title: An Assessment of the Molecular Diversity of Ticks and Tick-Borne Microorganisms of Small Ruminants in Pakistan
Article Snippet: .. The BLASTn function of the National Centre for Biotechnology Information (NCBI) ( https://blast.ncbi.nlm.nih.gov/Blast.cgi ) was used to match the identities of individual sequences; sequence identity matrices were established using BioEdit [ ]. ..



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